The Brain Simulation Platform "Live Papers" |
Authors: Stefano Masoli* 1, Marialuisa Tognolina* 1, Umberto Laforenza 2, Francesco Moccia 3, Egidio D'Angelo 1,4
Author information: 1 Department of Brain and Behavioral Sciences, University of Pavia, Via Forlanini 6, I-27100, Pavia, Italy, 2 Department of Molecular Medicine, University of Pavia, Via Forlanini 6, I-27100, Pavia, Italy, 3 Department of Biology and Biotechnology, University of Pavia, Via Forlanini 6, I-27100, Pavia, Italy, 4 Brain Connectivity Center, IRCCS Mondino Foundation, Via Mondino 2, I-27100, Pavia, Italy, * Co-Author,
Corresponding author: Egidio D'Angelo ( dangelo@unipv.it )
Journal: Nature
Download Url: https://www.nature.com/articles/s42003-020-0953-x
Citation: Masoli S.*, Tognolina M.*, Laforenza U., Moccia F., D’Angelo E. Parameter tuning differentiates granule cell subtypes enriching transmission properties at the cerebellum input stage. Nature Communications Biology 2020.
DOI: https://doi.org/10.1038/s42003-020-0953-x
Licence: the Creative Commons Attribution (CC BY) license applies for all files. Under this Open Access license anyone may copy, distribute, or reuse the files as long as the authors and the original source are properly cited.
Data and models: Experimental data and models used in the paper are available at the links reported below, grouped into the following categories:
The morphology for the dendrites and soma is in .asc format. The axon was custom generated using a modified BluePyOpt class.
Granule cell dend-soma morphology: | archiveDownload |
Use the BSP Neuron As A Service (NaaS) tool to do in silico experiments with the single cell models shown in Fig. 6A of the paper:
> Start by clicking on any button below to run a simulation.
> After entering the NaaS page, click on the "Simulation" tab, adjust the current strength with the appropriate value, and run the simulation by clicking the "Start simulation" button.
> To correctly run a simulation, the temperature need to be set at 32°, the vinit at -70mV and, to match the paper experiments, the positive current injections are: 10, 16 and 22pA.
The optimization results for each morphology are individually available in the Model Catalog at the following links: